Mockup 04 · 🥉 low shared context · micropublication

Specs instead of papers — several Evidence bundles compiled into one narrative

Independently-addressable Evidence bundles are compiled into a Jupyter Book micropublication where a Claim/model emerges above them; the prose is AI-drafted, human-edited, and every subfigure links back to its still-live bundle — the bundles are the source of truth, the narrative is one rendering (R7, R11).

🔒 mira.science/pub/maglov2-magnetosensitivity ⌘ L
MIRA · Jupyter Book
▣ micropublication · compiled from 2 bundles

Magnetosensitivity of MagLOV2 in E. coli

a micropublication · Quantum Biology Institute · part of “multi-omics of magnetosensitivity in microbial model organisms”

The model these bundles support

The claim below lives in no single bundle — it emerges across them. Compiling the micropublication did not fold the evidence into prose; each bundle stays an addressable discourse node, and two of them support the same model.

Claim · model emerges across bundles
A radical-pair quantum mechanism underlies MagLOV2 magnetosensitivity
A field-dependent, sign-changing response that saturates at higher fields is a signature predicted by the radical-pair model. The model is asserted by neither result alone — it is the throughline the two Evidence bundles jointly support.
node radical-pair-model
Claim -->
supports ↑ · 2 Evidence
Evidence · bundle A
MFE sign flipped from positive to negative as field strength increased
Across 0.5–2.5 mT the mean magnetic-field effect was positive at low field, crossed zero, and turned negative by ~2.5 mT (1 experiment per field, 74 colonies each).
node maglov2-mfe-7c1ae04
Evidence · bundle B
MFE is nonmonotonic and plateaus at higher field strength
Extending to 8 mT, the effect deepens then plateaus rather than growing without bound — and the low-field sign flip replicates, strengthening the radical-pair reading.
node maglov2-mfe-plateau-b1f29d
also supports → Claim: “the MFE saturates at high field”

The compiled narrative

AI-drafted human-edited · narrative is one rendering of the bundles

Living organisms appear able to sense magnetic fields far weaker than thermal noise, and the leading explanation is quantum: a transient radical pair whose spin state, and therefore whose chemical fate, is nudged by an applied field. We asked whether MagLOV2, a flavin-based reporter expressed in E. coli, carries a measurable signature of that mechanism.

Imaging live colonies on the bacterioscope across five field strengths, we found that the sign of the mean magnetic-field effect flips from positive to negative as the field strengthens at low fields — positive near 0.5 mT, crossing zero, and clearly negative by 2.5 mT (Fig. 1). A sign change at low field is not what a simple thermal or heating artifact would produce; it is, however, the kind of non-trivial field dependence a radical-pair model predicts.

Pushing the field higher, a second experiment shows the effect is nonmonotonic and plateaus rather than growing without bound, while independently replicating the low-field sign flip (Fig. 2). Saturation at high field is a further radical-pair hallmark. Read together — and neither result asserts it alone — the two bundles support a common model: a radical-pair quantum mechanism underlies MagLOV2 magnetosensitivity.

Each figure remains a live discourse node, not a flattened image: follow a panel back to its bundle to reach the analysis commit, the curated dataset, and the lab-notebook caveats behind it.

Figure 1 MFE flips sign with field strength
Evidence A
MFE = 0 +0.4 +0.2 0 −0.2 −0.4 mean MFE (a.u.) 0.5 1.0 1.5 2.0 2.5 applied magnetic field (mT) sign flips

Mean MFE at 0.5–2.5 mT (1 experiment each, 74 colonies per field; SEM with fit, cycle and biological variation propagated). Positive at low field, negative by ~2.5 mT.

view bundle · maglov2-mfe-7c1ae04
mean MFE ± SEM · n = 74 colonies/field · remains independently addressable illustrative · unpublished — workshop prototype
Figure 2 Nonmonotonic — the MFE plateaus at higher field
Evidence B
MFE = 0 plateau +0.2 0 −0.3 −0.6 mean MFE (a.u.) 0.5 2 4 6 8 applied magnetic field (mT) flip replicates

Extending to 8 mT, the effect deepens then saturates rather than growing without bound; the low-field sign flip is reproduced. Supports the model and a further claim about high-field saturation.

view bundle · maglov2-mfe-plateau-b1f29d
mean MFE ± SEM · 0.5–8 mT · replicates Fig. 1 sign flip · remains independently addressable illustrative · unpublished — workshop prototype
Compiled from 2 Evidence bundles · rendered from JSON-LD · powered by Discourse Graphs